STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17260.1KEGG: gvg:HMPREF0421_20946 1.4e-145 hemK; protein-(glutamine-N5) methyltransferase K02493; Psort location: Cytoplasmic, score: 7.50. (302 aa)    
Predicted Functional Partners:
PrfA
KEGG: rha:RHA1_ro01483 3.5e-94 prfA; peptide chain release factor 1 K02835; Psort location: Cytoplasmic, score: 9.97.
 
 0.998
KXA17259.1
KEGG: apb:SAR116_0691 6.3e-17 Sua5/YciO/YrdC/YwlC family protein K07566; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.969
KXA17258.1
KEGG: gvh:HMPREF9231_0627 4.9e-191 glycosyltransferase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.917
KXA16021.1
ATP synthase F0, C subunit; KEGG: gvh:HMPREF9231_0134 3.8e-33 atpE; ATP synthase F0 subunit C K02110; Psort location: CytoplasmicMembrane, score: 9.55.
  
   0.884
AtpA
ATP synthase F1, alpha subunit; KEGG: gvh:HMPREF9231_0137 1.3e-286 atpA; ATP synthase F1 subunit alpha K02111; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.882
AtpG
ATP synthase F1, gamma subunit; KEGG: gvh:HMPREF9231_0138 6.0e-170 atpG; ATP synthase F1 subunit gamma K02115; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.882
AtpH
ATP synthase F1, delta subunit; KEGG: gvg:HMPREF0421_20006 3.3e-98 atpH; ATP synthase F1 sector subunit delta K02113; Psort location: Cytoplasmic, score: 7.50.
  
   0.880
AtpD
ATP synthase F1, beta subunit; KEGG: gvg:HMPREF0421_20003 1.5e-260 atpD; ATP synthase F1 sector subunit beta K02112; Psort location: CytoplasmicMembrane, score: 8.78.
  
   0.872
KXA16027.1
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: gvg:HMPREF0421_20002 3.8e-49 atpC; ATP synthase F1 sector subunit epsilon K02114.
  
   0.872
RpmE
Ribosomal protein L31; KEGG: apb:SAR116_2278 2.6e-11 50S ribosomal protein L31 K02909; Psort location: Cytoplasmic, score: 9.67.
  
  
 0.830
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.