STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17220.1Putative Na+/H+ antiporter NhaA; KEGG: eci:UTI89_C0022 5.9e-53 nhaA; pH-dependent sodium/proton antiporter K03313; Psort location: CytoplasmicMembrane, score: 10.00. (419 aa)    
Predicted Functional Partners:
KXA17219.1
TIGR00730 family protein; KEGG: gvg:HMPREF0421_20965 6.1e-145 fmt2; methionyl-tRNA formyltransferase K06966.
       0.848
KXA15920.1
Large conductance mechanosensitive channel protein; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.649
KXA15663.1
Putative regulatory protein.
       0.589
KXA17221.1
Hypothetical protein; KEGG: dpp:DICPUDRAFT_150076 2.1e-07 hypothetical protein; K14437 chromodomain-helicase-DNA-binding protein 7.
     
 0.482
KXA15307.1
histidine--tRNA ligase; KEGG: gvg:HMPREF0421_20833 1.3e-229 hisS; histidine--tRNA ligase K01892; Psort location: Cytoplasmic, score: 10.00.
       0.481
PyrG
CTP synthase; KEGG: gvg:HMPREF0421_21084 2.9e-296 pyrG; CTP synthase K01937; Psort location: Cytoplasmic, score: 7.50.
  
    0.423
KXA15201.1
Citrate transporter; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.407
KXA17259.1
KEGG: apb:SAR116_0691 6.3e-17 Sua5/YciO/YrdC/YwlC family protein K07566; Psort location: Cytoplasmic, score: 7.50.
  
    0.400
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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