STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PykPyruvate kinase; KEGG: gvg:HMPREF0421_20976 5.7e-261 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 7.50. (495 aa)    
Predicted Functional Partners:
Eno
Phosphopyruvate hydratase; KEGG: gvg:HMPREF0421_20718 5.9e-227 eno; enolase K01689; Psort location: Cytoplasmic, score: 9.97.
  
 0.990
RplB
Ribosomal protein L2; KEGG: apb:SAR116_2394 2.0e-75 50S ribosomal protein L2 K02886; Psort location: Cytoplasmic, score: 7.50.
  
 0.975
KXA15441.1
KEGG: gva:HMPREF0424_0663 1.3e-158 lactate/malate dehydrogenase, NAD binding domain protein; K00016 L-lactate dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 0.974
RplE
Ribosomal protein L5; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.973
RplC
KEGG: apb:SAR116_2391 1.6e-43 50S ribosomal protein L3 K02906; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.972
RplR
KEGG: apb:SAR116_2407 5.1e-15 50S ribosomal protein L18 K02881; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.972
RplW
Ribosomal protein L23; KEGG: apb:SAR116_2393 3.5e-16 50S ribosomal protein L25 K02892; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.971
RplX
Ribosomal protein L24; KEGG: apb:SAR116_2402 3.3e-20 50S ribosomal protein L24 K02895; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.971
KXA15698.1
Ribosomal protein L6; KEGG: ccv:CCV52592_1018 3.3e-34 rplF; 50S ribosomal protein L6 K02933; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.969
RplV
Ribosomal protein L22; KEGG: apb:SAR116_2396 1.0e-16 50S ribosomal protein L22 K02890; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.968
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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