STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17199.1Addiction module antitoxin, RelB/DinJ family. (104 aa)    
Predicted Functional Partners:
KXA17200.1
Toxin-antitoxin system, toxin component, RelE family; Psort location: Cytoplasmic, score: 7.50.
 
 
   0.978
KXA17254.1
Hypothetical protein; Psort location: Extracellular, score: 8.91.
  
 0.741
KXA17431.1
Addiction module toxin, RelE/StbE family; Psort location: Cytoplasmic, score: 7.50.
  
 0.661
KXA16059.1
Addiction module toxin, RelE/StbE family.
  
 0.661
KXA17291.1
Hypothetical protein.
   
   0.597
KXA16058.1
Addiction module antitoxin, RelB/DinJ family; Psort location: Cytoplasmic, score: 7.50.
  
     0.529
KXA17288.1
Addiction module antitoxin, RelB/DinJ family.
  
     0.493
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.