STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17201.1Hypothetical protein. (572 aa)    
Predicted Functional Partners:
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
       0.689
KXA17584.1
Hypothetical protein; KEGG: llk:LLKF_0779 0.00018 srtC; sortase; K07284 sortase A.
 
     0.538
KXA15299.1
KEGG: gvh:HMPREF9231_0768 3.4e-192 IMP dehydrogenase family protein; K00088 IMP dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
     
 0.486
KXA16037.1
KEGG: gvh:HMPREF9231_0165 0. HsdR family type I site-specific deoxyribonuclease K01153; Psort location: Cytoplasmic, score: 7.50.
  
   0.458
KXA15279.1
Hypothetical protein; KEGG: gva:HMPREF0424_0871 0. hypothetical protein; K01153 type I restriction enzyme, R subunit; Psort location: Cytoplasmic, score: 7.50.
  
   0.458
KXA17613.1
RecF/RecN/SMC protein; KEGG: hpa:HPAG1_1080 6.4e-05 hypothetical protein; K01553 myosin ATPase; Psort location: Cytoplasmic, score: 7.50.
  
    0.427
KXA17202.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.423
KXA15274.1
Hypothetical protein; KEGG: rpe:RPE_0561 3.7e-10 DNA methylase N-4/N-6 domain-containing protein; K00571 site-specific DNA-methyltransferase (adenine-specific); Psort location: Cytoplasmic, score: 7.50.
  
    0.415
KXA15298.1
Excinuclease ABC, C subunit; KEGG: gvg:HMPREF0421_20802 0. uvrC; excision endonuclease subunit UvrC K03703; Psort location: Cytoplasmic, score: 9.95.
   
   0.412
KXA15377.1
Amidohydrolase family protein; KEGG: gvg:HMPREF0421_20749 3.1e-228 pyrC; putative dihydroorotase K01465; Psort location: Cytoplasmic, score: 7.50.
   
   0.405
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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