STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17129.1Acetyltransferase, GNAT family; KEGG: atm:ANT_29020 1.1e-06 putative acetyltransferase K03789. (174 aa)    
Predicted Functional Partners:
KXA17128.1
Hypothetical protein; KEGG: gvh:HMPREF9231_0594 2.8e-14 coaE; dephospho-CoA kinase K00859.
  
  
 0.677
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
     
 0.674
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
     
 0.557
KXA15368.1
Universal bacterial protein YeaZ; KEGG: bbp:BBPR_1080 3.9e-56 glycoprotease protein family; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.460
KXA16297.1
KEGG: bde:BDP_1927 1.7e-149 Maf-like protein K06287; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.448
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.436
KXA17214.1
Translation metalloprotein YbeY; KEGG: aai:AARI_16830 1.9e-38 metalloprotease K07042; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.424
KXA17130.1
BNR/Asp-box repeat protein; KEGG: bbp:BBPR_1794 9.0e-144 exo-alpha-sialidase K01186; Psort location: Extracellular, score: 9.98.
       0.415
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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