STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17133.1Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; KEGG: gvg:HMPREF0421_20985 8.2e-150 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase K01491; Psort location: Cytoplasmic, score: 7.50. (294 aa)    
Predicted Functional Partners:
KXA16204.1
Formate--tetrahydrofolate ligase; KEGG: gvg:HMPREF0421_20275 3.0e-262 fhs; formate--tetrahydrofolate ligase K01938; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.987
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.920
KXA15164.1
KEGG: gvh:HMPREF9231_0691 3.0e-175 purD; phosphoribosylamine--glycine ligase K01945.
 
  
 0.916
KXA17014.1
KEGG: gvh:HMPREF9231_1073 2.5e-210 xseA; exodeoxyribonuclease VII large subunit K03601; Psort location: Cytoplasmic, score: 9.97.
 
    0.883
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.859
RpsA
KEGG: bde:BDP_0900 1.0e-238 rpsA; 30S ribosomal protein S1 K02945; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.851
KXA15139.1
KEGG: gvh:HMPREF9231_0718 6.4e-269 putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase.
  
  
 0.847
GuaB
KEGG: gvh:HMPREF9231_0628 3.5e-268 guaB; inosine-5'-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.819
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.779
Pyk
Pyruvate kinase; KEGG: gvg:HMPREF0421_20976 5.7e-261 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 7.50.
     
 0.750
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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