STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17134.1ABC transporter, substrate-binding protein. (396 aa)    
Predicted Functional Partners:
KXA15402.1
Putative manganese transport system ATP-binding protein MntA; KEGG: gvg:HMPREF0421_20687 1.3e-119 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.51.
 
  
 0.873
KXA17621.1
Anchored repeat-type ABC transporter, permease subunit; KEGG: apb:SAR116_2225 1.3e-30 zinc ABC transporter membrane spanning protein K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.775
RpsA
KEGG: bde:BDP_0900 1.0e-238 rpsA; 30S ribosomal protein S1 K02945; Psort location: Cytoplasmic, score: 9.97.
     
 0.765
KXA17133.1
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; KEGG: gvg:HMPREF0421_20985 8.2e-150 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase K01491; Psort location: Cytoplasmic, score: 7.50.
       0.748
KXA15403.1
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 2.4e-17 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.721
KXA15404.1
ABC 3 transport family protein; KEGG: pfe:PSF113_0030 5.9e-10 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.702
UvrB
Excinuclease ABC, B subunit; KEGG: gvg:HMPREF0421_20977 0. uvrB; excision endonuclease subunit UvrB K03702; Psort location: Cytoplasmic, score: 9.97.
     
 0.695
KXA17204.1
dephospho-CoA kinase; KEGG: gvg:HMPREF0421_20978 2.5e-100 coaE; dephospho-CoA kinase K00859; Psort location: Cytoplasmic, score: 7.50.
       0.692
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
     
 0.692
KXA17622.1
Anchored repeat-type ABC transporter, ATP-binding subunit; KEGG: rdn:HMPREF0733_10998 3.4e-57 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
  
 0.643
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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