STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17144.1LemA family protein; Psort location: Cytoplasmic, score: 7.50. (184 aa)    
Predicted Functional Partners:
KXA16092.1
Oxidoreductase, aldo/keto reductase family protein; KEGG: gvg:HMPREF0421_20336 3.3e-146 aldo/keto reductase; Psort location: Cytoplasmic, score: 9.97.
  
    0.704
KXA16089.1
Ribosomal protein S15; KEGG: apb:SAR116_1577 1.1e-19 30S ribosomal protein S15 K02956; Psort location: Cytoplasmic, score: 9.67.
       0.692
KXA16091.1
Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; KEGG: gvg:HMPREF0421_20335 0. pnp; polyribonucleotide nucleotidyltransferase K00962; Psort location: Cytoplasmic, score: 9.97.
       0.692
KXA15376.1
KEGG: gvg:HMPREF0421_20748 8.6e-194 pyrB; aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.97.
       0.692
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
       0.689
KXA15888.1
Peptidase, M48 family; KEGG: gvg:HMPREF0421_20164 6.9e-114 htpX; heat shock protein HtpX K03799; Psort location: CytoplasmicMembrane, score: 8.16.
  
    0.681
KXA17145.1
Hypothetical protein.
       0.680
KXA16093.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.668
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
       0.651
KXA16003.1
RNA methyltransferase, TrmH family; KEGG: bbp:BBPR_1680 2.4e-95 23S rRNA methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.639
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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