STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AckAAcetate kinase; KEGG: gvg:HMPREF0421_20574 6.8e-217 ackA; acetate kinase K00925; Psort location: Cytoplasmic, score: 9.97. (414 aa)    
Predicted Functional Partners:
KXA17059.1
KEGG: gvh:HMPREF9231_0975 1.2e-272 pta; phosphate acetyltransferase K13788.
 
 0.994
Xfp
KEGG: gvg:HMPREF0421_20576 0. xfp; fructose-6-phosphate phosphoketolase.
 
  
 0.971
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.796
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
  
  
 0.787
Pyk
Pyruvate kinase; KEGG: gvg:HMPREF0421_20976 5.7e-261 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.698
KXA15987.1
Adenylosuccinate synthase; KEGG: gvh:HMPREF9231_1337 4.6e-227 purA; adenylosuccinate synthase K01939; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.689
KXA15889.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: gvh:HMPREF9231_0039 9.7e-234 putative NADPH-ferredoxin reductase FprA; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97.
     
 0.647
KXA15159.1
KEGG: gvg:HMPREF0421_20872 1.9e-198 purT; phosphoribosylglycinamide formyltransferase 2 K08289; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.642
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.641
KXA16068.1
Acyltransferase; KEGG: bnm:BALAC2494_00792 3.4e-105 Acyltransferase transferring groups other than amino-acyl groups; Psort location: CytoplasmicMembrane, score: 10.00.
       0.634
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.