STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17061.1KEGG: gvg:HMPREF0421_20573 8.1e-230 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800. (459 aa)    
Predicted Functional Partners:
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
KXA16672.1
Chorismate synthase; KEGG: gvh:HMPREF9231_0449 1.0e-197 aroC; chorismate synthase K01736; Psort location: Cytoplasmic, score: 7.50.
 
 0.986
KXA15255.1
Shikimate dehydrogenase substrate binding domain protein; KEGG: gvg:HMPREF0421_20764 1.3e-183 aroE; shikimate dehydrogenase K00014; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.932
KXA15135.1
Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.
 
  
 0.829
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.815
KXA16401.1
Prephenate dehydrogenase; KEGG: gvg:HMPREF0421_21121 7.3e-165 tyrA; prephenate dehydrogenase K04517; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.777
KXA17065.1
Hypothetical protein; KEGG: lru:HMPREF0538_20600 1.0e-08 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.692
KXA16400.1
Prephenate dehydratase; KEGG: gvh:HMPREF9231_0415 6.7e-171 prephenate dehydratase K14170; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.655
KXA15941.1
tRNA adenylyltransferase; KEGG: gvg:HMPREF0421_20113 2.9e-250 pcnA; RNA nucleotidyltransferase; K00970 poly(A) polymerase; Psort location: Cytoplasmic, score: 7.50.
 
    0.646
KXA16814.1
Putative dTDP-4-dehydrorhamnose reductase; KEGG: gvg:HMPREF0421_20400 3.7e-257 rmlCD; bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; K00067 dTDP-4-dehydrorhamnose reductase K01790; Psort location: Cytoplasmic, score: 7.50.
  
    0.640
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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