STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17062.1Cobalt transport protein; KEGG: sap:Sulac_1647 1.3e-12 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00. (297 aa)    
Predicted Functional Partners:
KXA17063.1
KEGG: bde:BDP_1327 1.5e-171 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 8.78.
 0.999
KXA17148.1
KEGG: gvg:HMPREF0421_21025 1.0e-128 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.984
KXA17064.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.965
KXA17149.1
KEGG: gvg:HMPREF0421_21026 1.5e-125 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.958
KXA16994.1
Hypothetical protein; KEGG: mcu:HMPREF0573_11021 0.0059 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.900
KXA16853.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.863
KXA17076.1
Cobalt ABC transporter, ATP-binding protein; KEGG: dku:Desku_2237 7.2e-71 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 9.99.
 0.846
KXA15338.1
KEGG: bde:BDP_1338 1.5e-166 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
 0.822
KXA16807.1
BioY family protein; KEGG: apb:SAR116_1163 3.8e-17 biotin biosynthesis protein BioY K03523; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.809
KXA17077.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.796
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.