STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17070.1Succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: gvg:HMPREF0421_20564 3.2e-283 sdhA; succinate dehydrogenase K00239; Psort location: CytoplasmicMembrane, score: 9.51. (659 aa)    
Predicted Functional Partners:
KXA17218.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: gvg:HMPREF0421_20964 7.0e-192 sdhB; succinate dehydrogenase K00240; Psort location: Cytoplasmic, score: 9.89.
 0.999
KXA15670.1
Putative ferredoxin-1; KEGG: bde:BDP_0410 2.5e-45 fdxC; fdxC Ferredoxin; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.915
KXA17069.1
DNA protecting protein DprA; KEGG: hip:CGSHiEE_07040 2.7e-30 2-isopropylmalate synthase K04096.
  
    0.861
KXA17068.1
Mg chelatase-like protein; KEGG: bde:BDP_0806 5.2e-171 ATPase-like magnesium chelatase subunit ChlI K07391.
  
  
 0.859
KXA17067.1
TIGR00252 family protein; KEGG: gvg:HMPREF0421_20567 6.3e-56 endonuclease K07460; Psort location: Cytoplasmic, score: 7.50.
       0.832
FusA
Translation elongation factor G; KEGG: bnm:BALAC2494_00509 0. Protein-synthesizing GTPase K02355; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.809
KXA16027.1
ATP synthase, delta/epsilon subunit, beta-sandwich domain protein; KEGG: gvg:HMPREF0421_20002 3.8e-49 atpC; ATP synthase F1 sector subunit epsilon K02114.
  
 
 0.782
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.768
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
 0.740
KXA16967.1
KEGG: gvh:HMPREF9231_1027 5.3e-162 L-lactate dehydrogenase K00016; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.721
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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