STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17073.1Response regulator receiver domain protein; KEGG: bde:BDP_0990 3.4e-96 two-component system response regulator K07183; Psort location: Cytoplasmic, score: 9.97. (262 aa)    
Predicted Functional Partners:
KXA16663.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bde:BDP_0879 9.3e-197 histidine kinase-like protein; Psort location: CytoplasmicMembrane, score: 8.78.
   
 0.916
KXA17072.1
KEGG: gvh:HMPREF9231_0991 0. polA; DNA-directed DNA polymerase K02335; Psort location: Cytoplasmic, score: 7.50.
       0.849
KXA17071.1
Dinuclear metal center protein, YbgI family; KEGG: hip:CGSHiEE_02770 1.5e-05 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 7.50.
       0.814
RpsA
KEGG: bde:BDP_0900 1.0e-238 rpsA; 30S ribosomal protein S1 K02945; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.722
KXA17066.1
KEGG: gvh:HMPREF9231_0984 0. glgX; glycogen debranching protein GlgX K02438; Psort location: Cytoplasmic, score: 9.97.
       0.692
KXA16957.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gvg:HMPREF0421_20540 3.3e-153 senX3; putative histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.692
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
     
 0.668
Pyk
Pyruvate kinase; KEGG: gvg:HMPREF0421_20976 5.7e-261 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 7.50.
       0.640
KXA15171.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gva:HMPREF0424_0721 2.0e-226 sensor histidine kinase/response regulator; K02484 two-component system, OmpR family, sensor kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
 0.588
KXA15953.1
KEGG: apb:SAR116_0035 7.2e-32 ammonium transporter K03320; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.579
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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