STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16943.1Cobalt transport protein; KEGG: bde:BDP_1327 3.4e-112 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00. (887 aa)    
Predicted Functional Partners:
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
0.999
KXA17040.1
Hypothetical protein.
  
 0.951
KXA17064.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.916
KXA15358.1
Hypothetical protein; KEGG: ddi:DDB_G0269486 0.00063 hypothetical protein; K15691 E3 ubiquitin-protein ligase RFWD3.
  
 
 0.832
KXA16994.1
Hypothetical protein; KEGG: mcu:HMPREF0573_11021 0.0059 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.823
KXA16853.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.814
KXA15948.1
KEGG: gvg:HMPREF0421_20105 5.3e-194 ABC transporter ATP-binding protein K10243; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
0.705
KXA16667.1
ABC transporter, substrate-binding protein, family 5; KEGG: kra:Krad_1125 6.5e-118 4-phytase K02035; Psort location: Cellwall, score: 9.21.
  
 
 0.704
KXA15682.1
KEGG: gvh:HMPREF9231_0240 0. adh; aldehyde-alcohol dehydrogenase 2 K04072; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.684
KXA17568.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.653
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.