STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16949.1Thymidylate synthase; KEGG: gvg:HMPREF0421_20547 8.6e-155 thyA; thymidylate synthase K00560; Psort location: Cytoplasmic, score: 9.97. (290 aa)    
Predicted Functional Partners:
KXA16948.1
Dihydrofolate reductase; KEGG: gvg:HMPREF0421_20548 2.5e-100 folA; dihydrofolate reductase K00287; Psort location: Cytoplasmic, score: 7.50.
  
 0.998
KXA16186.1
KEGG: gvh:HMPREF9231_0066 6.9e-240 tgt; tRNA-guanine transglycosylase K00773; Psort location: Cytoplasmic, score: 7.50.
 
    0.915
KXA16180.1
dCTP deaminase; KEGG: gvh:HMPREF9231_0072 1.0e-103 dcd; dCTP deaminase K01494; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.913
KXA15530.1
Putative dUTP diphosphatase; KEGG: gvh:HMPREF9231_0929 1.8e-74 dut; dUTP diphosphatase K01520; Psort location: Cytoplasmic, score: 7.50.
  
 0.880
KXA16268.1
KEGG: gvg:HMPREF0421_20231 6.7e-116 phosphoglycerate mutase K15634; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.879
KXA16947.1
Low molecular weight phosphotyrosine protein phosphatase; KEGG: gvg:HMPREF0421_20549 8.4e-93 ptpA; putative protein-tyrosine-phosphatase K01104; Psort location: Cytoplasmic, score: 7.50.
       0.868
KXA16950.1
OsmC-like protein.
       0.838
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
     
 0.830
KXA15611.1
Ham1 family protein; KEGG: gvh:HMPREF9231_1158 4.9e-104 Ham1 family protein; K02428 dITP/XTP pyrophosphatase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.830
KXA16200.1
dTMP kinase; KEGG: gvh:HMPREF9231_1283 1.8e-106 tmk; dTMP kinase K00943; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.782
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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