STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16953.1NlpC/P60 family protein; KEGG: bnm:BALAC2494_00662 6.2e-49 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.73. (255 aa)    
Predicted Functional Partners:
KXA16954.1
CHAP domain protein; KEGG: bde:BDP_0523 9.2e-71 surface antigen; Psort location: Extracellular, score: 9.72.
  
  
 0.822
KXA16952.1
KEGG: apb:SAR116_0757 5.2e-06 universal stress protein family protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.619
KXA16297.1
KEGG: bde:BDP_1927 1.7e-149 Maf-like protein K06287; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.590
KXA15882.1
ROK family protein; KEGG: gvg:HMPREF0421_20174 6.7e-155 glcK; putative glucokinase K00845; Psort location: Cytoplasmic, score: 9.97.
     
 0.580
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
       0.577
KXA17593.1
Acyltransferase; KEGG: gvg:HMPREF0421_20601 5.0e-111 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655; Psort location: Cytoplasmic, score: 7.50.
     
 0.572
Upp
KEGG: gvg:HMPREF0421_20089 1.5e-109 upp; uracil phosphoribosyltransferase K00761; Psort location: Cytoplasmic, score: 7.50.
       0.567
KXA15623.1
G5 domain protein; KEGG: bde:BDP_0983 3.2e-15 TraG-like protein.
  
  
 0.526
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.515
KXA15135.1
Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.
       0.512
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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