STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16962.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (215 aa)    
Predicted Functional Partners:
KXA16961.1
Tetratricopeptide repeat protein; KEGG: scl:sce8649 4.2e-05 protein kinase.
   
 0.998
KXA15889.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: gvh:HMPREF9231_0039 9.7e-234 putative NADPH-ferredoxin reductase FprA; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97.
       0.523
KXA17602.1
Hypothetical protein; KEGG: ase:ACPL_6362 3.9e-24 Replicase polyprotein 1ab; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.484
KXA17065.1
Hypothetical protein; KEGG: lru:HMPREF0538_20600 1.0e-08 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.473
KXA16658.1
Hypothetical protein; KEGG: gvg:HMPREF0421_20995 7.2e-261 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.452
KXA16083.1
Ser/Thr phosphatase family protein; KEGG: afm:AFUA_4G12720 0.0056 phosphoesterase K01175; Psort location: Cytoplasmic, score: 7.50.
  
     0.413
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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