STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16968.1GTP-binding protein HflX; KEGG: ica:Intca_2161 2.0e-132 GTP-binding protein HflX K03665; Psort location: Cytoplasmic, score: 9.97. (505 aa)    
Predicted Functional Partners:
KXA15841.1
Ribosomal protein L11; KEGG: pmj:P9211_02221 4.2e-43 rplK; 50S ribosomal protein L11 K02867; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.946
RplS
Ribosomal protein L19; KEGG: scp:HMPREF0833_10394 3.2e-29 argB; acetylglutamate kinase K02884; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.939
RplC
KEGG: apb:SAR116_2391 1.6e-43 50S ribosomal protein L3 K02906; Psort location: Cytoplasmic, score: 9.67.
   
 
 0.938
RplT
Ribosomal protein L20; KEGG: apb:SAR116_1231 1.7e-23 50S ribosomal protein L20 K02887; Psort location: Cytoplasmic, score: 9.97.
 
 
   0.935
KXA16390.1
Ribosomal protein L32; Psort location: Extracellular, score: 8.91.
   
 
 0.935
RpmA
Ribosomal protein L27; KEGG: apb:SAR116_1855 1.9e-22 50S ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.67.
   
 
 0.934
KXA16310.1
Ribosomal protein L21; KEGG: apb:SAR116_1856 4.6e-14 50S ribosomal protein L21 K02888.
   
   0.934
RplV
Ribosomal protein L22; KEGG: apb:SAR116_2396 1.0e-16 50S ribosomal protein L22 K02890; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.930
RplB
Ribosomal protein L2; KEGG: apb:SAR116_2394 2.0e-75 50S ribosomal protein L2 K02886; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.927
KXA15680.1
Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.
    
 
 0.926
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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