STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16975.1Inosine-uridine preferring nucleoside hydrolase; KEGG: gvg:HMPREF0421_20522 2.5e-171 rihB; ribosylpyrimidine nucleosidase; Psort location: Cytoplasmic, score: 7.50. (336 aa)    
Predicted Functional Partners:
KXA16974.1
Transporter, major facilitator family protein; KEGG: rcp:RCAP_rcc03385 9.8e-10 emrB; multidrug resistance protein B K03446; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.842
KXA16442.1
Putative ribokinase; KEGG: gvh:HMPREF9231_0377 2.1e-160 putative ribokinase; K00852 ribokinase; Psort location: Cytoplasmic, score: 9.67.
 
  
 0.834
KXA16976.1
Hypothetical protein.
       0.773
Eno
Phosphopyruvate hydratase; KEGG: gvg:HMPREF0421_20718 5.9e-227 eno; enolase K01689; Psort location: Cytoplasmic, score: 9.97.
     
 0.468
GlnA
KEGG: gva:HMPREF0424_1112 8.6e-242 glnA_1; glutamine synthetase, type I K01915; Psort location: Cytoplasmic, score: 9.97.
     
 0.465
KXA16651.1
KEGG: gvh:HMPREF9231_0586 0. glgB; 1,4-alpha-glucan-branching protein K00700.
  
  
 0.442
KXA15207.1
Alanine racemase; KEGG: gvg:HMPREF0421_20911 4.2e-233 alr; alanine racemase K01775; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.418
KXA17146.1
Hypothetical protein; KEGG: ssr:SALIVB_0977 6.2e-49 signal transduction histidine kinase, LytS; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.409
KXA15203.1
KEGG: gva:HMPREF0424_1044 4.1e-171 inosine-uridine preferring nucleoside hydrolase; K01239 purine nucleosidase.
 
   
0.403
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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