STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16978.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
GlnA
KEGG: gva:HMPREF0424_1112 8.6e-242 glnA_1; glutamine synthetase, type I K01915; Psort location: Cytoplasmic, score: 9.97.
       0.783
KXA16979.1
DNA polymerase III, alpha subunit; KEGG: gvg:HMPREF0421_20519 0. dnaE; DNA-directed DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97.
       0.713
KXA16982.1
DivIVA domain protein; KEGG: edi:EDI_175070 2.9e-11 myosin-2 heavy chain, non muscle K10352; Psort location: Cytoplasmic, score: 9.97.
       0.465
KXA16980.1
KEGG: gvh:HMPREF9231_1036 1.1e-127 RluA family pseudouridine synthase K06180; Psort location: Cytoplasmic, score: 9.97.
       0.451
KXA16981.1
Signal peptidase II; KEGG: gvh:HMPREF9231_1037 9.1e-80 lspA; signal peptidase II K03101; Psort location: CytoplasmicMembrane, score: 10.00.
       0.451
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.