STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16984.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
KXA16985.1
KEGG: suy:SA2981_1144 7.7e-87 ftsZ; Cell division protein FtsZ K03531; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.994
KXA16983.1
YGGT family protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.921
KXA17019.1
POTRA domain protein, FtsQ-type.
  
  
 0.894
KXA16973.1
GIY-YIG catalytic domain protein.
  
 
 0.877
KXA17022.1
KEGG: kfl:Kfla_2886 8.3e-54 cell division protein FtsW; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.861
KXA16008.1
Pyridoxal phosphate enzyme, YggS family; KEGG: axy:AXYL_06119 3.6e-30 alanine racemase K06997; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.833
KXA17021.1
KEGG: gvh:HMPREF9231_1083 1.4e-177 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.811
KXA16986.1
TIM-barrel protein, nifR3 family; KEGG: bnm:BALAC2494_02053 2.1e-167 Oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
       0.806
KXA16093.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.787
GlyS
glycine--tRNA ligase; KEGG: gvg:HMPREF0421_20511 2.1e-277 glyQS; glycine--tRNA ligase K01880; Psort location: Cytoplasmic, score: 10.00.
       0.774
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.