STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17007.1ABC transporter, permease protein; KEGG: tle:Tlet_0072 1.3e-50 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00. (335 aa)    
Predicted Functional Partners:
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
KXA17008.1
Putative dipeptide transport system permease protein DppC; KEGG: apb:SAR116_0601 5.1e-38 binding-protein-dependent transport system inner membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.981
KXA17006.1
ABC transporter, substrate-binding protein, family 5; KEGG: ase:ACPL_5612 7.7e-83 peptide/nickel transport system substrate-binding protein; Psort location: Cellwall, score: 9.20.
 
 0.949
KXA15214.1
ABC transporter, substrate-binding protein, family 5; KEGG: smd:Smed_3647 7.5e-37 4-phytase K02035; Psort location: Cellwall, score: 9.20.
 0.911
KXA17455.1
Putative oligopeptide transport system permease protein OppC; KEGG: bra:BRADO1095 1.8e-35 oppC; peptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.900
KXA15211.1
KEGG: bra:BRADO2619 4.6e-37 ABC transporter permease K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.892
KXA16665.1
Putative oligopeptide ABC transporter, permease protein OppC; KEGG: bra:BRADO1095 2.1e-41 oppC; peptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.879
KXA16073.1
ABC transporter, substrate-binding protein, family 5; KEGG: gwc:GWCH70_0479 3.9e-25 4-phytase K02035.
 0.857
KXA17005.1
Putative phosphonate C-P lyase system protein PhnK; KEGG: axy:AXYL_05630 5.8e-101 ABC transporter K02031:K02032; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.766
KXA15877.1
KEGG: gvg:HMPREF0421_20179 2.4e-143 ABC transporter ATP-binding protein K02032; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.705
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.