STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17026.1Hypothetical protein; KEGG: bde:BDP_1547 1.9e-65 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase. (393 aa)    
Predicted Functional Partners:
KXA17025.1
KEGG: gvh:HMPREF9231_1087 5.0e-198 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.943
KXA17027.1
KEGG: gvh:HMPREF9231_1089 1.0e-293 penicillin-binding protein, transpeptidase domain protein; K03587 cell division protein FtsI (penicillin-binding protein 3); Psort location: CytoplasmicMembrane, score: 9.51.
  
  
 0.934
KXA17024.1
KEGG: gvh:HMPREF9231_1086 2.5e-187 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.924
KXA17029.1
KEGG: gvh:HMPREF9231_1091 7.9e-152 mraW; S-adenosyl-methyltransferase MraW K03438; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.919
KXA17030.1
Protein MraZ; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.915
KXA17028.1
Hypothetical protein; KEGG: cyb:CYB_1750 0.0077 Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase.
  
    0.906
KXA17023.1
KEGG: gvg:HMPREF0421_20472 8.7e-233 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.885
KXA17021.1
KEGG: gvh:HMPREF9231_1083 1.4e-177 putative undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; Psort location: CytoplasmicMembrane, score: 8.78.
  
 
 0.852
KXA15957.1
CobB/CobQ-like protein; KEGG: ssr:SALIVB_1273 1.1e-40 cobyric acid synthase K07009; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.848
KXA17022.1
KEGG: kfl:Kfla_2886 8.3e-54 cell division protein FtsW; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.810
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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