STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17037.1Putative FK506-binding protein; KEGG: gvg:HMPREF0421_20457 1.6e-66 fkbP; peptidyl-prolyl cis-trans isomerase. (135 aa)    
Predicted Functional Partners:
KXA15705.1
KEGG: bcz:BCZK0127 9.0e-25 infA; translation initiation factor IF-1 K02518; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.999
DnaK
Chaperone protein DnaK; KEGG: bbp:BBPR_1798 0. dnaK; molecular chaperone DnaK K04043; Psort location: Cytoplasmic, score: 9.97.
  
 0.894
KXA17036.1
KEGG: apb:SAR116_2228 1.5e-13 transcription elongation factor K03624; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.879
KXA17038.1
L-serine ammonia-lyase; KEGG: gvh:HMPREF9231_1100 7.7e-225 putative L-serine ammonia-lyase; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 7.50.
       0.812
KXA16186.1
KEGG: gvh:HMPREF9231_0066 6.9e-240 tgt; tRNA-guanine transglycosylase K00773; Psort location: Cytoplasmic, score: 7.50.
    
 0.772
KXA15532.1
KEGG: gvg:HMPREF0421_20626 4.0e-93 cypB; peptidyl-prolyl cis-trans isomerase K03767; Psort location: Cytoplasmic, score: 9.97.
  
 0.757
KXA15671.1
KEGG: gvh:HMPREF9231_0230 4.2e-194 ImpB/MucB/SamB family protein; K02346 DNA polymerase IV; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.717
KXA15528.1
Hypothetical protein; KEGG: ddi:DDB_G0268430 2.6e-06 hypothetical protein; K15255 ATP-dependent DNA helicase PIF1.
     
 0.643
KXA15326.1
DEAD/DEAH box helicase; KEGG: gvg:HMPREF0421_20822 0. helicase; K03727 ATP-dependent RNA helicase HelY; Psort location: Cytoplasmic, score: 7.50.
       0.639
KXA16185.1
Trypsin; KEGG: gvg:HMPREF0421_20188 6.7e-258 htrA; serine protease HtrA K08372.
  
 
 0.632
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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