STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17039.1e1-E2 ATPase; KEGG: gva:HMPREF0424_0568 0. E1-E2 ATPase; K01552; Psort location: CytoplasmicMembrane, score: 10.00. (917 aa)    
Predicted Functional Partners:
KXA17040.1
Hypothetical protein.
  
  
 0.820
KXA16642.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.730
KXA16641.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.695
KXA16640.1
TRAM domain protein; KEGG: gva:HMPREF0424_0493 3.5e-229 TRAM domain protein; K00599; Psort location: Cytoplasmic, score: 7.50.
       0.692
KXA16181.1
Putative calcium-translocating P-type ATPase, PMCA-type; KEGG: gvg:HMPREF0421_20193 0. atp2C1; putative calcium-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.635
KXA16643.1
KEGG: gvg:HMPREF0421_21079 2.1e-144 xthA; exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.617
KXA16182.1
RNA methyltransferase, TrmH family, group 3; KEGG: gvg:HMPREF0421_20191 7.9e-184 RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.606
KXA17038.1
L-serine ammonia-lyase; KEGG: gvh:HMPREF9231_1100 7.7e-225 putative L-serine ammonia-lyase; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 7.50.
     
 0.585
KXA17041.1
KEGG: gvh:HMPREF9231_1125 2.7e-112 putative tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase; Psort location: Cytoplasmic, score: 7.50.
       0.472
KXA16648.1
Cation diffusion facilitator family transporter; KEGG: eci:UTI89_C0749 7.7e-35 zinc transporter ZitB K03295; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.462
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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