STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17043.1KEGG: bbp:BBPR_0463 3.5e-181 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00. (755 aa)    
Predicted Functional Partners:
KXA15719.1
KEGG: bde:BDP_0469 4.1e-100 amino acid transport ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
   
0.913
KXA17417.1
KEGG: gvg:HMPREF0421_20925 2.2e-133 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
   
0.908
PstB
KEGG: gvh:HMPREF9231_1200 1.4e-136 pstB; phosphate ABC transporter ATP-binding protein K02036; Psort location: CytoplasmicMembrane, score: 9.96.
   
 
0.906
KXA15948.1
KEGG: gvg:HMPREF0421_20105 5.3e-194 ABC transporter ATP-binding protein K10243; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
0.879
KXA17044.1
Hypothetical protein; KEGG: bbp:BBPR_0462 6.6e-148 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.836
KXA17148.1
KEGG: gvg:HMPREF0421_21025 1.0e-128 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 8.78.
     
0.795
KXA15436.1
KEGG: gvg:HMPREF0421_20715 1.2e-77 ABC transporter ATP-binding protein K15555; Psort location: CytoplasmicMembrane, score: 8.78.
 
0.655
DnaK
Chaperone protein DnaK; KEGG: bbp:BBPR_1798 0. dnaK; molecular chaperone DnaK K04043; Psort location: Cytoplasmic, score: 9.97.
 
 0.630
KXA17608.1
Putative mutacin ABC transporter, ATP-binding protein MutF; KEGG: bya:BANAU_3847 5.2e-61 mrsF; ATP-binding protein MrsF K09687; Psort location: CytoplasmicMembrane, score: 8.78.
  
0.627
KXA17569.1
KEGG: rdn:HMPREF0733_11515 5.3e-52 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 8.78.
  
0.627
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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