STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17045.1KEGG: gvh:HMPREF9231_1130 9.6e-124 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068; Psort location: Cytoplasmic, score: 9.97. (235 aa)    
Predicted Functional Partners:
NrdD
KEGG: gvh:HMPREF9231_1131 0. nrdD; anaerobic ribonucleoside-triphosphate reductase K00527; Psort location: Cytoplasmic, score: 7.50.
 
 0.993
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
     
 0.812
KXA16814.1
Putative dTDP-4-dehydrorhamnose reductase; KEGG: gvg:HMPREF0421_20400 3.7e-257 rmlCD; bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; K00067 dTDP-4-dehydrorhamnose reductase K01790; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.754
KXA15305.1
KEGG: ccm:Ccan_01720 2.5e-45 protein mrp-like protein K03593.
     
 0.733
KXA15161.1
KEGG: gvh:HMPREF9231_0694 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.97.
     
 0.701
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
       0.692
GltX
glutamate--tRNA ligase; KEGG: gvh:HMPREF9231_0209 6.5e-276 gltX; glutamate--tRNA ligase K01885; Psort location: Cytoplasmic, score: 9.97.
       0.662
KXA17013.1
KEGG: gvg:HMPREF0421_20484 3.7e-44 xseB; exodeoxyribonuclease VII small subunit K03602.
       0.634
KXA17014.1
KEGG: gvh:HMPREF9231_1073 2.5e-210 xseA; exodeoxyribonuclease VII large subunit K03601; Psort location: Cytoplasmic, score: 9.97.
       0.614
KXA17217.1
RNA methyltransferase; KEGG: gvh:HMPREF9231_0612 8.9e-137 RsmE family RNA methyltransferase K09761; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.540
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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