STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16807.1BioY family protein; KEGG: apb:SAR116_1163 3.8e-17 biotin biosynthesis protein BioY K03523; Psort location: CytoplasmicMembrane, score: 10.00. (230 aa)    
Predicted Functional Partners:
KXA16808.1
Carbamoyl-phosphate synthase L chain, ATP binding domain protein; KEGG: gvg:HMPREF0421_21230 0. bccA; biotin carboxylase K11263; Psort location: Cytoplasmic, score: 7.50.
 
     0.889
KXA15338.1
KEGG: bde:BDP_1338 1.5e-166 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.874
KXA17148.1
KEGG: gvg:HMPREF0421_21025 1.0e-128 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 8.78.
   
 
 0.869
KXA17149.1
KEGG: gvg:HMPREF0421_21026 1.5e-125 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.96.
   
 
 0.869
KXA17147.1
Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 8.0e-17 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.809
KXA17062.1
Cobalt transport protein; KEGG: sap:Sulac_1647 1.3e-12 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.809
KXA17075.1
Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 2.9e-19 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.809
KXA16809.1
Carboxyl transferase domain protein; KEGG: gvg:HMPREF0421_21229 1.2e-281 pccB; propionyl-CoA carboxylase; Psort location: Cytoplasmic, score: 7.50.
       0.794
KXA17077.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.783
KXA16941.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.783
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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