STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16812.1Glycosyl hydrolase family 25; KEGG: bde:BDP_2061 1.4e-89 1,4-beta-N-acetylmuramidase. (682 aa)    
Predicted Functional Partners:
KXA16661.1
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 2.8e-13 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.942
KXA15174.1
WXG100 family type VII secretion target.
  
  
 0.710
KXA17586.1
Repeat protein; KEGG: bbp:BBPR_0025 2.3e-15 alpha-L-arabinofuranosidase; Psort location: Cellwall, score: 9.26.
  
 
 0.658
KXA16701.1
GA module; KEGG: dwi:Dwil_GK22102 2.6e-27 GK22102 gene product from transcript GK22102-RA; K00907 myosin-light-chain kinase; Psort location: Cellwall, score: 9.39.
  
 
 0.658
KXA16439.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: isc:IscW_ISCW000348 1.1e-38 secreted mucin MUC17, putative; Psort location: Cellwall, score: 9.39.
  
 
 0.658
KXA15355.1
Hypothetical protein; KEGG: cfa:489960 2.8e-06 HS3ST4; heparan sulfate (glucosamine) 3-O-sulfotransferase 4; K09678 [heparan sulfate]-glucosamine 3-sulfotransferase 4.
  
 
 0.658
KXA15243.1
Bacterial surface protein 26-residue PARCEL repeat-containing domain protein; KEGG: pfh:PFHG_03923 6.2e-11 hypothetical protein similar to histone acetyltransferase; K06062 histone acetyltransferase.
  
 
 0.658
KXA15443.1
KEGG: gvg:HMPREF0421_20721 4.7e-250 exopolyphosphatase family protein; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; Psort location: Cytoplasmic, score: 9.97.
     
 0.627
KXA15158.1
FtsK/SpoIIIE family protein; KEGG: eab:ECABU_c09310 2.0e-100 ftsK; cell division protein FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.624
KXA15251.1
Guanylate kinase; KEGG: gvh:HMPREF9231_0804 4.8e-97 gmk; guanylate kinase K00942; Psort location: Cytoplasmic, score: 9.97.
  
 0.618
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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