STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16815.1KEGG: gvh:HMPREF9231_1155 1.7e-190 rfbB; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 7.50. (344 aa)    
Predicted Functional Partners:
KXA16814.1
Putative dTDP-4-dehydrorhamnose reductase; KEGG: gvg:HMPREF0421_20400 3.7e-257 rmlCD; bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; K00067 dTDP-4-dehydrorhamnose reductase K01790; Psort location: Cytoplasmic, score: 7.50.
  
 0.999
KXA16813.1
KEGG: gvg:HMPREF0421_20399 4.1e-155 rmlA; glucose-1-phosphate thymidylyltransferase K00973; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.997
KXA16824.1
KEGG: gvh:HMPREF9231_1145 1.3e-149 glycosyltransferase, group 2 family protein K12990; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.849
KXA16816.1
Putative O-antigen export system ATP-binding protein RfbB; KEGG: rsa:RSal33209_1615 4.0e-70 polysaccharide/polyol phosphate ABC transporter ATPase K09691; Psort location: CytoplasmicMembrane, score: 9.96.
     
 0.834
KXA16817.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.777
KXA17042.1
UDP-glucose 4-epimerase; KEGG: gva:HMPREF0424_1119 5.1e-173 galE; UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 9.97.
  
  
0.775
KXA16826.1
UDP-galactopyranose mutase; KEGG: gvg:HMPREF0421_20414 1.9e-214 rfbD; UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.772
KXA16819.1
Putative bactoprenol glucosyl transferase-like protein; KEGG: csc:Csac_1057 1.3e-80 ribonuclease III; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.767
KXA16825.1
KEGG: gvh:HMPREF9231_1144 4.4e-190 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.703
KXA16818.1
NAD dependent epimerase/dehydratase family protein; KEGG: bbp:BBPR_0064 1.6e-112 nucleoside-diphosphate-sugar epimerase family protein.
  
  
 0.701
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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