STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16822.1KEGG: gvg:HMPREF0421_20408 0. rhamnan synthesis protein F; K07272 rhamnosyltransferase; Psort location: Cytoplasmic, score: 7.50. (647 aa)    
Predicted Functional Partners:
KXA16823.1
Acyltransferase; KEGG: hse:Hsero_3592 1.4e-08 acetyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.982
KXA16814.1
Putative dTDP-4-dehydrorhamnose reductase; KEGG: gvg:HMPREF0421_20400 3.7e-257 rmlCD; bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; K00067 dTDP-4-dehydrorhamnose reductase K01790; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.859
KXA16818.1
NAD dependent epimerase/dehydratase family protein; KEGG: bbp:BBPR_0064 1.6e-112 nucleoside-diphosphate-sugar epimerase family protein.
 
     0.849
KXA16825.1
KEGG: gvh:HMPREF9231_1144 4.4e-190 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.836
KXA16816.1
Putative O-antigen export system ATP-binding protein RfbB; KEGG: rsa:RSal33209_1615 4.0e-70 polysaccharide/polyol phosphate ABC transporter ATPase K09691; Psort location: CytoplasmicMembrane, score: 9.96.
    
 0.831
KXA16824.1
KEGG: gvh:HMPREF9231_1145 1.3e-149 glycosyltransferase, group 2 family protein K12990; Psort location: Cytoplasmic, score: 7.50.
       0.815
KXA16821.1
KEGG: gvh:HMPREF9231_1148 1.1e-184 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.690
KXA16826.1
UDP-galactopyranose mutase; KEGG: gvg:HMPREF0421_20414 1.9e-214 rfbD; UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 7.50.
       0.647
KXA16817.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.618
KXA15872.1
BNR/Asp-box repeat protein; KEGG: gvg:HMPREF0421_20186 0. sialidase A; Psort location: Extracellular, score: 8.19.
 
     0.570
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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