STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16831.1Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 1.4e-15 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein). (507 aa)    
Predicted Functional Partners:
KXA16393.1
Site-specific recombinase, phage integrase family; KEGG: bsr:I33_1800 3.9e-41 xerC; ATP-dependent protease HslV K03733; Psort location: Cytoplasmic, score: 9.67.
   
 0.545
KXA16402.1
Phage integrase, SAM-like domain protein; KEGG: pfe:PSF113_1062 5.2e-45 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 9.97.
   
 0.545
KXA16827.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.484
KXA16832.1
Hypothetical protein.
       0.412
KXA15266.1
Putative HTH-type transcriptional activator mta; KEGG: llo:LLO_0515 3.6e-13 GTP cyclohydrolase; K06879 7-cyano-7-deazaguanine reductase.
 
   
 0.407
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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