STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16853.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (238 aa)    
Predicted Functional Partners:
KXA17062.1
Cobalt transport protein; KEGG: sap:Sulac_1647 1.3e-12 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.863
KXA17063.1
KEGG: bde:BDP_1327 1.5e-171 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.839
KXA16943.1
Cobalt transport protein; KEGG: bde:BDP_1327 3.4e-112 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.814
KXA16252.1
Phosphomethylpyrimidine kinase; KEGG: gvg:HMPREF0421_20209 1.7e-298 theD; phosphomethylpyrimidine kinase K00941; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.745
KXA15338.1
KEGG: bde:BDP_1338 1.5e-166 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.740
RpmE
Ribosomal protein L31; KEGG: apb:SAR116_2278 2.6e-11 50S ribosomal protein L31 K02909; Psort location: Cytoplasmic, score: 9.67.
       0.617
KXA17075.1
Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 2.9e-19 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.606
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
       0.593
KXA16854.1
Hypothetical protein.
       0.563
KXA17076.1
Cobalt ABC transporter, ATP-binding protein; KEGG: dku:Desku_2237 7.2e-71 monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.474
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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