Def protein (Gardnerella vaginalis) - STRING interaction network

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Score

Def

Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50. (217 aa)

Predicted Functional Partners:

KXA16380.1

0.880

KXA15289.1

0.880

RplT

0.879

KXA15541.1

0.878

RpsT

0.875

RpsI

0.862

RpmI

0.860

RplX

0.857

KXA16310.1

0.856

KXA15680.1

0.855

Your Current Organism:

Gardnerella vaginalis

NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Def	KXA15289.1	HMPREF3204_00408	HMPREF3204_01188	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	KEGG: gvg:HMPREF0421_20794 3.6e-156 fmt; methionyl-tRNA formyltransferase K00604; Psort location: Cytoplasmic, score: 9.97.	0.880
Def	KXA15541.1	HMPREF3204_00408	HMPREF3204_01044	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	Trigger factor; KEGG: gvh:HMPREF9231_0915 5.8e-220 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 7.50.	0.878
Def	KXA15680.1	HMPREF3204_00408	HMPREF3204_00945	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	0.855
Def	KXA16310.1	HMPREF3204_00408	HMPREF3204_00560	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L21; KEGG: apb:SAR116_1856 4.6e-14 50S ribosomal protein L21 K02888.	0.856
Def	KXA16380.1	HMPREF3204_00408	HMPREF3204_00498	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S16; KEGG: apb:SAR116_1817 1.1e-19 30S ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.97.	0.880
Def	RplT	HMPREF3204_00408	HMPREF3204_00406	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L20; KEGG: apb:SAR116_1231 1.7e-23 50S ribosomal protein L20 K02887; Psort location: Cytoplasmic, score: 9.97.	0.879
Def	RplX	HMPREF3204_00408	HMPREF3204_00960	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L24; KEGG: apb:SAR116_2402 3.3e-20 50S ribosomal protein L24 K02895; Psort location: Cytoplasmic, score: 9.97.	0.857
Def	RpmI	HMPREF3204_00408	HMPREF3204_00405	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L35.	0.860
Def	RpsI	HMPREF3204_00408	HMPREF3204_00946	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S9; KEGG: apb:SAR116_0492 2.7e-25 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.97.	0.862
Def	RpsT	HMPREF3204_00408	HMPREF3204_01307	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S20; KEGG: rcu:RCOM_2071510 6.2e-10 formamidopyrimidine-DNA glycosylase, putative; Psort location: Cytoplasmic, score: 9.64.	0.875
KXA15289.1	Def	HMPREF3204_01188	HMPREF3204_00408	KEGG: gvg:HMPREF0421_20794 3.6e-156 fmt; methionyl-tRNA formyltransferase K00604; Psort location: Cytoplasmic, score: 9.97.	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	0.880
KXA15289.1	KXA16310.1	HMPREF3204_01188	HMPREF3204_00560	KEGG: gvg:HMPREF0421_20794 3.6e-156 fmt; methionyl-tRNA formyltransferase K00604; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein L21; KEGG: apb:SAR116_1856 4.6e-14 50S ribosomal protein L21 K02888.	0.490
KXA15289.1	KXA16380.1	HMPREF3204_01188	HMPREF3204_00498	KEGG: gvg:HMPREF0421_20794 3.6e-156 fmt; methionyl-tRNA formyltransferase K00604; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein S16; KEGG: apb:SAR116_1817 1.1e-19 30S ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.97.	0.430
KXA15289.1	RpsT	HMPREF3204_01188	HMPREF3204_01307	KEGG: gvg:HMPREF0421_20794 3.6e-156 fmt; methionyl-tRNA formyltransferase K00604; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein S20; KEGG: rcu:RCOM_2071510 6.2e-10 formamidopyrimidine-DNA glycosylase, putative; Psort location: Cytoplasmic, score: 9.64.	0.415
KXA15541.1	Def	HMPREF3204_01044	HMPREF3204_00408	Trigger factor; KEGG: gvh:HMPREF9231_0915 5.8e-220 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 7.50.	Peptide deformylase; KEGG: gvg:HMPREF0421_20431 1.5e-111 def; peptide deformylase K01462; Psort location: Cytoplasmic, score: 7.50.	0.878
KXA15541.1	KXA15680.1	HMPREF3204_01044	HMPREF3204_00945	Trigger factor; KEGG: gvh:HMPREF9231_0915 5.8e-220 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.	0.930
KXA15541.1	KXA16310.1	HMPREF3204_01044	HMPREF3204_00560	Trigger factor; KEGG: gvh:HMPREF9231_0915 5.8e-220 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L21; KEGG: apb:SAR116_1856 4.6e-14 50S ribosomal protein L21 K02888.	0.921
KXA15541.1	KXA16380.1	HMPREF3204_01044	HMPREF3204_00498	Trigger factor; KEGG: gvh:HMPREF9231_0915 5.8e-220 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein S16; KEGG: apb:SAR116_1817 1.1e-19 30S ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.97.	0.809
KXA15541.1	RplT	HMPREF3204_01044	HMPREF3204_00406	Trigger factor; KEGG: gvh:HMPREF9231_0915 5.8e-220 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L20; KEGG: apb:SAR116_1231 1.7e-23 50S ribosomal protein L20 K02887; Psort location: Cytoplasmic, score: 9.97.	0.856
KXA15541.1	RplX	HMPREF3204_01044	HMPREF3204_00960	Trigger factor; KEGG: gvh:HMPREF9231_0915 5.8e-220 tig; trigger factor K03545; Psort location: Cytoplasmic, score: 7.50.	Ribosomal protein L24; KEGG: apb:SAR116_2402 3.3e-20 50S ribosomal protein L24 K02895; Psort location: Cytoplasmic, score: 9.97.	0.960

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