STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16868.1Hypothetical protein; KEGG: pfe:PSF113_1419 1.9e-10 yfgO; protein YfgO K03548; Psort location: CytoplasmicMembrane, score: 10.00. (549 aa)    
Predicted Functional Partners:
KXA16869.1
KEGG: gvh:HMPREF9231_1119 6.2e-216 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.933
KXA16693.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.791
KXA16018.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.784
KXA15187.1
Hypothetical protein; KEGG: pjd:Pjdr2_4027 1.4e-07 hypothetical protein; K14205 phosphatidylglycerol lysyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.783
KXA16694.1
KEGG: gvg:HMPREF0421_20438 2.1e-215 D-Ala-D-Ala carboxypeptidase 3 (S13) domain-containing protein; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4); Psort location: Extracellular, score: 9.72.
 
     0.727
KXA15155.1
Hypothetical protein.
 
     0.719
KXA16695.1
KEGG: gvg:HMPREF0421_20440 6.4e-150 tRNA(Ile)-lysidine synthase K04075; Psort location: Cytoplasmic, score: 7.50.
  
    0.703
KXA16696.1
KEGG: gvg:HMPREF0421_20441 7.2e-87 hpt; hypoxanthine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.97.
       0.692
KXA16697.1
KEGG: gvh:HMPREF9231_1113 0. hflB; ATP-dependent metallopeptidase HflB K03798; Psort location: CytoplasmicMembrane, score: 9.99.
       0.692
KXA16698.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.692
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.