STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16692.1Daunorubicin/doxorubicin resistance ATP-binding protein DrrA family protein; KEGG: bde:BDP_0544 1.8e-99 ABC transporter ATP-binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.78. (283 aa)    
Predicted Functional Partners:
KXA16693.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.965
KXA17622.1
Anchored repeat-type ABC transporter, ATP-binding subunit; KEGG: rdn:HMPREF0733_10998 3.4e-57 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
 
 
0.937
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
   
0.873
KXA15338.1
KEGG: bde:BDP_1338 1.5e-166 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
0.778
KXA16694.1
KEGG: gvg:HMPREF0421_20438 2.1e-215 D-Ala-D-Ala carboxypeptidase 3 (S13) domain-containing protein; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4); Psort location: Extracellular, score: 9.72.
     
 0.713
AtpD
ATP synthase F1, beta subunit; KEGG: gvg:HMPREF0421_20003 1.5e-260 atpD; ATP synthase F1 sector subunit beta K02112; Psort location: CytoplasmicMembrane, score: 8.78.
   
 0.629
KXA17459.1
KEGG: gvg:HMPREF0421_20290 1.4e-234 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
0.627
KXA17460.1
KEGG: bde:BDP_2113 2.5e-228 ABC transporter ATP-binding protein/permease K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
0.627
KXA17141.1
KEGG: bya:BANAU_3421 3.3e-82 Lipid A export ATP-binding/permease protein msbA; Psort location: CytoplasmicMembrane, score: 10.00.
  
0.627
KXA17043.1
KEGG: bbp:BBPR_0463 3.5e-181 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.627
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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