STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16697.1KEGG: gvh:HMPREF9231_1113 0. hflB; ATP-dependent metallopeptidase HflB K03798; Psort location: CytoplasmicMembrane, score: 9.99. (950 aa)    
Predicted Functional Partners:
KXA16698.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.927
KXA16696.1
KEGG: gvg:HMPREF0421_20441 7.2e-87 hpt; hypoxanthine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.918
RplS
Ribosomal protein L19; KEGG: scp:HMPREF0833_10394 3.2e-29 argB; acetylglutamate kinase K02884; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.900
RpmA
Ribosomal protein L27; KEGG: apb:SAR116_1855 1.9e-22 50S ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.899
RplC
KEGG: apb:SAR116_2391 1.6e-43 50S ribosomal protein L3 K02906; Psort location: Cytoplasmic, score: 9.67.
 
 
 0.899
KXA15702.1
Ribosomal protein L15; KEGG: apb:SAR116_2410 9.9e-19 50S ribosomal protein L15 K02876.
  
 
 0.893
KXA15680.1
Ribosomal protein L13; KEGG: apb:SAR116_0493 9.2e-32 50S ribosomal protein L13 K02871; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.891
KXA16380.1
Ribosomal protein S16; KEGG: apb:SAR116_1817 1.1e-19 30S ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.97.
  
 0.886
RpsI
Ribosomal protein S9; KEGG: apb:SAR116_0492 2.7e-25 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.97.
  
 0.884
KXA16089.1
Ribosomal protein S15; KEGG: apb:SAR116_1577 1.1e-19 30S ribosomal protein S15 K02956; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.876
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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