STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16641.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (257 aa)    
Predicted Functional Partners:
KXA16640.1
TRAM domain protein; KEGG: gva:HMPREF0424_0493 3.5e-229 TRAM domain protein; K00599; Psort location: Cytoplasmic, score: 7.50.
       0.925
KXA16642.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.906
KXA15615.1
ABC transporter, ATP-binding protein; KEGG: bbp:BBPR_0362 9.2e-158 ABC transporter permease K02049; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
 0.882
KXA16643.1
KEGG: gvg:HMPREF0421_21079 2.1e-144 xthA; exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.837
KXA17040.1
Hypothetical protein.
    
  0.808
KXA15528.1
Hypothetical protein; KEGG: ddi:DDB_G0268430 2.6e-06 hypothetical protein; K15255 ATP-dependent DNA helicase PIF1.
 
     0.807
KXA15878.1
KEGG: gvg:HMPREF0421_20178 0. ABC transporter ATP-binding protein K02031:K02034; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.770
KXA16996.1
DivIVA domain repeat protein; KEGG: ddi:DDB_G0278901 0.00042 protein kinase, STE group; K00924.
 
     0.730
KXA15529.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.706
KXA16018.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.702
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.