STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16642.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (278 aa)    
Predicted Functional Partners:
KXA15529.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.913
KXA16641.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.906
KXA16640.1
TRAM domain protein; KEGG: gva:HMPREF0424_0493 3.5e-229 TRAM domain protein; K00599; Psort location: Cytoplasmic, score: 7.50.
       0.872
KXA16643.1
KEGG: gvg:HMPREF0421_21079 2.1e-144 xthA; exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.97.
       0.846
KXA16946.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.772
KXA15325.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.752
KXA15366.1
KEGG: gvh:HMPREF9231_0826 1.1e-152 putative DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta; Psort location: Cellwall, score: 8.19.
 
     0.746
KXA17039.1
e1-E2 ATPase; KEGG: gva:HMPREF0424_0568 0. E1-E2 ATPase; K01552; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.730
KXA15306.1
Hypothetical protein; KEGG: tgo:TGME49_042790 1.5e-09 trichohyalin, putative; Psort location: Cytoplasmic, score: 7.50.
  
     0.717
KXA16945.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.709
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.