STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16644.1Arginine repressor protein; KEGG: psm:PSM_B0572 0.00091 hisD; bifunctional HisD: L-histidinal:NAD+ dehydrogenase; L-histidinol:NAD+ dehydrogenase K00013; Psort location: Cytoplasmic, score: 9.97. (180 aa)    
Predicted Functional Partners:
KXA17605.1
Argininosuccinate lyase; KEGG: gvh:HMPREF9231_0962 6.2e-239 argH; argininosuccinate lyase K01755; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.999
KXA17606.1
Argininosuccinate synthase; KEGG: gvg:HMPREF0421_20588 3.6e-211 argG; argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.999
KXA16645.1
KEGG: gvh:HMPREF9231_0965 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.879
KXA16646.1
phenylalanine--tRNA ligase, alpha subunit; KEGG: gvg:HMPREF0421_20584 6.5e-189 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889; Psort location: Cytoplasmic, score: 10.00.
     
 0.808
KXA16647.1
RNA methyltransferase, TrmH family; KEGG: bde:BDP_1300 2.6e-59 methylase K03437; Psort location: Cytoplasmic, score: 7.50.
     
 0.785
KXA16307.1
Glutamate 5-kinase; KEGG: gvh:HMPREF9231_1231 2.1e-176 proB; glutamate 5-kinase K00931; Psort location: Cytoplasmic, score: 9.95.
     
 0.745
KXA15242.1
KEGG: gva:HMPREF0424_0921 3.1e-102 pyrE; orotate phosphoribosyltransferase K00762; Psort location: CytoplasmicMembrane, score: 9.55.
     
 0.698
KXA15287.1
Transcription repressor HrcA; KEGG: apb:SAR116_1619 9.4e-30 transcriptional regulator of heat shock gene K03705; Psort location: Cytoplasmic, score: 7.50.
     
 0.698
KXA17035.1
Repressor LexA; KEGG: gvg:HMPREF0421_20459 1.4e-115 lexA; repressor lexA K01356; Psort location: Cytoplasmic, score: 7.50.
      
 0.692
ArgS
arginine--tRNA ligase; KEGG: gvh:HMPREF9231_0203 0. argS; arginine--tRNA ligase K01887; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.682
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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