STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16652.1Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: bbp:BBPR_0734 2.4e-86 two-component response regulator; Psort location: Cytoplasmic, score: 9.97. (249 aa)    
Predicted Functional Partners:
KXA16653.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bde:BDP_0891 5.1e-125 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.996
KXA16957.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gvg:HMPREF0421_20540 3.3e-153 senX3; putative histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.942
KXA15171.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gva:HMPREF0424_0721 2.0e-226 sensor histidine kinase/response regulator; K02484 two-component system, OmpR family, sensor kinase; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.939
KXA17607.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mcu:HMPREF0573_10444 6.9e-185 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.68.
 
 
 0.867
KXA16651.1
KEGG: gvh:HMPREF9231_0586 0. glgB; 1,4-alpha-glucan-branching protein K00700.
  
  
 0.862
KXA16650.1
CarD-like protein; KEGG: apb:SAR116_1070 1.2e-15 transcriptional regulator K07736; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.779
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
     
 0.668
KXA15133.1
Putative replication-associated recombination protein A; KEGG: bde:BDP_0795 5.3e-194 ATPase AAA K07478.
  
  
 0.646
KXA15266.1
Putative HTH-type transcriptional activator mta; KEGG: llo:LLO_0515 3.6e-13 GTP cyclohydrolase; K06879 7-cyano-7-deazaguanine reductase.
   
 
 0.480
RpoD
RNA polymerase sigma factor RpoD; KEGG: lru:HMPREF0538_21998 4.6e-92 rpoD; DNA-directed RNA polymerase sigma subunit RpoD K03086; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.450
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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