STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16659.1Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 9.51. (454 aa)    
Predicted Functional Partners:
KXA16660.1
Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
   
0.947
KXA16658.1
Hypothetical protein; KEGG: gvg:HMPREF0421_20995 7.2e-261 brp/Blh family beta-carotene 15,15'-monooxygenase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.815
KXA16657.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.799
KXA16986.1
TIM-barrel protein, nifR3 family; KEGG: bnm:BALAC2494_02053 2.1e-167 Oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
 
    0.795
KXA16814.1
Putative dTDP-4-dehydrorhamnose reductase; KEGG: gvg:HMPREF0421_20400 3.7e-257 rmlCD; bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; K00067 dTDP-4-dehydrorhamnose reductase K01790; Psort location: Cytoplasmic, score: 7.50.
     
 0.754
KXA16661.1
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 2.8e-13 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.747
KXA16662.1
Transcription factor WhiB.
     
 0.729
KXA16958.1
Phosphate transport system regulatory protein PhoU; KEGG: apb:SAR116_1202 1.8e-17 phosphate uptake regulator PhoU K02039; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.678
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
     
 0.648
RpmE
Ribosomal protein L31; KEGG: apb:SAR116_2278 2.6e-11 50S ribosomal protein L31 K02909; Psort location: Cytoplasmic, score: 9.67.
       0.637
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.