STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16425.1Transporter, major facilitator family protein; KEGG: ase:ACPL_1277 2.1e-18 EmrB/QacA subfamily drug resistance transporter; Psort location: CytoplasmicMembrane, score: 10.00. (463 aa)    
Predicted Functional Partners:
KXA16426.1
Putative cytidine/uridine-specific hydrolase; KEGG: gvg:HMPREF0421_21146 1.0e-160 rihB2; ribosylpyrimidine nucleosidase; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.806
KXA16989.1
Amidohydrolase; KEGG: gvg:HMPREF0421_20509 9.9e-193 hipO; putative hippurate hydrolase K01451; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.648
KXA15203.1
KEGG: gva:HMPREF0424_1044 4.1e-171 inosine-uridine preferring nucleoside hydrolase; K01239 purine nucleosidase.
  
  
 0.540
KXA17057.1
KEGG: gvh:HMPREF9231_0973 3.1e-276 GMP synthase; K01951 GMP synthase (glutamine-hydrolysing); Psort location: Cytoplasmic, score: 7.50.
     
 0.497
KXA16974.1
Transporter, major facilitator family protein; KEGG: rcp:RCAP_rcc03385 9.8e-10 emrB; multidrug resistance protein B K03446; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.487
KXA16442.1
Putative ribokinase; KEGG: gvh:HMPREF9231_0377 2.1e-160 putative ribokinase; K00852 ribokinase; Psort location: Cytoplasmic, score: 9.67.
 
  
 0.483
KXA16814.1
Putative dTDP-4-dehydrorhamnose reductase; KEGG: gvg:HMPREF0421_20400 3.7e-257 rmlCD; bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; K00067 dTDP-4-dehydrorhamnose reductase K01790; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.418
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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