STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16403.1Putative sporulation initiation inhibitor protein Soj; KEGG: sen:SACE_5241 1.4e-81 chromosome partitioning protein K03496; Psort location: CytoplasmicMembrane, score: 8.78. (279 aa)    
Predicted Functional Partners:
KXA15936.1
ParB-like protein; KEGG: pub:SAR11_0354 2.1e-42 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 9.97.
 
 0.983
KXA16402.1
Phage integrase, SAM-like domain protein; KEGG: pfe:PSF113_1062 5.2e-45 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 9.97.
     
 0.871
KXA16401.1
Prephenate dehydrogenase; KEGG: gvg:HMPREF0421_21121 7.3e-165 tyrA; prephenate dehydrogenase K04517; Psort location: Cytoplasmic, score: 7.50.
  
    0.836
TypA
KEGG: bbp:BBPR_0603 0. typA; GTP-binding protein TypA K06207; Psort location: CytoplasmicMembrane, score: 8.78.
     
 0.774
KXA15928.1
KEGG: pmj:P9211_05681 2.1e-71 dnaA; chromosomal replication initiation protein K02313; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.748
GuaB
KEGG: gvh:HMPREF9231_0628 3.5e-268 guaB; inosine-5'-monophosphate dehydrogenase K00088; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.683
KXA17600.1
KEGG: gvh:HMPREF9231_0958 2.9e-115 rrmJ; ribosomal RNA large subunit methyltransferase J K06442; Psort location: Cytoplasmic, score: 7.50.
  
    0.681
KXA17599.1
Inorganic polyphosphate/ATP-NAD kinase family protein; KEGG: gvg:HMPREF0421_20594 2.0e-155 ppnK; NAD(+) kinase K00858; Psort location: Cytoplasmic, score: 9.97.
  
    0.674
KXA17598.1
DNA repair protein RecN; KEGG: apb:SAR116_2325 1.2e-47 ATPase K03631; Psort location: Cytoplasmic, score: 7.50.
     
 0.672
KXA15135.1
Ribosome biogenesis GTPase Der; KEGG: bbp:BBPR_1002 5.1e-292 GTP-binding protein K03977; Psort location: Cytoplasmic, score: 9.95.
  
  
 0.670
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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