STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16363.1RelA/SpoT domain protein; KEGG: bbp:BBPR_1279 1.5e-94 relA2; GTP pyrophosphokinase; Psort location: Cytoplasmic, score: 7.50. (271 aa)    
Predicted Functional Partners:
KXA15531.1
KEGG: gvh:HMPREF9231_0928 0. relA; GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.722
KXA16649.1
KEGG: gvh:HMPREF9231_0969 8.6e-155 miaA; tRNA dimethylallyltransferase K00791; Psort location: Cytoplasmic, score: 7.50.
       0.692
KXA16362.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.686
KXA15618.1
Ribonuclease HII; KEGG: gvg:HMPREF0421_21216 1.6e-98 rnhB; ribonuclease HII K03470.
     
 0.680
KXA15157.1
KEGG: gvh:HMPREF9231_0699 9.2e-87 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 10.00.
       0.643
KXA15158.1
FtsK/SpoIIIE family protein; KEGG: eab:ECABU_c09310 2.0e-100 ftsK; cell division protein FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00.
       0.627
KXA16361.1
Sortase family protein; KEGG: gva:HMPREF0424_1214 2.5e-107 sortase family protein; K07284 sortase A.
       0.613
KXA16364.1
Hypothetical protein; KEGG: apb:SAR116_1414 6.2e-26 integral membrane protein K06890; Psort location: CytoplasmicMembrane, score: 10.00.
       0.595
KXA15156.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 9.7e-05 fadD; long-chain-fatty-acid--CoA ligase K03743.
       0.593
KXA16814.1
Putative dTDP-4-dehydrorhamnose reductase; KEGG: gvg:HMPREF0421_20400 3.7e-257 rmlCD; bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; K00067 dTDP-4-dehydrorhamnose reductase K01790; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.489
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.