STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16308.1Obg family GTPase CgtA; KEGG: bya:BANAU_2707 2.5e-84 obgE; tRNA modification GTPase mnmE K03979; Psort location: Cytoplasmic, score: 7.50. (554 aa)    
Predicted Functional Partners:
RpmA
Ribosomal protein L27; KEGG: apb:SAR116_1855 1.9e-22 50S ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.67.
 
 0.990
KXA16310.1
Ribosomal protein L21; KEGG: apb:SAR116_1856 4.6e-14 50S ribosomal protein L21 K02888.
  
 
 0.984
KXA17195.1
Iojap-like protein; KEGG: mul:MUL_3692 2.8e-21 nadD; bifunctional nicotinate-nucleotide adenylyltransferase NadD/hypothetical protein; K00969 nicotinate-nucleotide adenylyltransferase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.975
KXA16307.1
Glutamate 5-kinase; KEGG: gvh:HMPREF9231_1231 2.1e-176 proB; glutamate 5-kinase K00931; Psort location: Cytoplasmic, score: 9.95.
  
  
 0.958
KXA15841.1
Ribosomal protein L11; KEGG: pmj:P9211_02221 4.2e-43 rplK; 50S ribosomal protein L11 K02867; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.935
RplT
Ribosomal protein L20; KEGG: apb:SAR116_1231 1.7e-23 50S ribosomal protein L20 K02887; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.929
KXA15149.1
KEGG: gvg:HMPREF0421_20862 3.3e-121 nadD; nicotinate-nucleotide adenylyltransferase K00969; Psort location: Cytoplasmic, score: 7.50.
  
 0.920
KXA16390.1
Ribosomal protein L32; Psort location: Extracellular, score: 8.91.
  
 
 0.909
RplB
Ribosomal protein L2; KEGG: apb:SAR116_2394 2.0e-75 50S ribosomal protein L2 K02886; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.903
RplQ
Ribosomal protein L17; KEGG: apb:SAR116_2416 1.9e-22 50S ribosomal protein L17 K02879; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.897
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.