STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16318.1Hypothetical protein; KEGG: gva:HMPREF0424_0610 3.8e-50 pulA_1; pullulanase, type I K01200. (344 aa)    
Predicted Functional Partners:
KXA16317.1
Hypothetical protein.
       0.588
KXA16294.1
Hypothetical protein; KEGG: eci:UTI89_C0735 6.2e-07 tolA; cell envelope integrity inner membrane protein TolA K03646.
      
0.527
KXA16316.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.491
KXA16313.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.432
KXA16314.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.432
KXA16315.1
Putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein; Psort location: Cytoplasmic, score: 7.50.
       0.432
KXA16248.1
Hypothetical protein; KEGG: dre:553347 2.6e-14 polr2a, im:7136071; polymerase (RNA) II (DNA directed) polypeptide A; K03006 DNA-directed RNA polymerase II subunit RPB1; Psort location: Cellwall, score: 9.20.
  
     0.409
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.