STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16297.1KEGG: bde:BDP_1927 1.7e-149 Maf-like protein K06287; Psort location: Cytoplasmic, score: 7.50. (490 aa)    
Predicted Functional Partners:
KXA16298.1
Homoserine kinase; KEGG: gvh:HMPREF9231_1240 1.7e-156 thrB; homoserine kinase K00872; Psort location: Cytoplasmic, score: 7.50.
     
 0.904
KXA16299.1
Homoserine dehydrogenase; KEGG: gvh:HMPREF9231_1241 1.8e-218 hom; homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.881
KXA16855.1
Protein FolC; KEGG: gvg:HMPREF0421_21186 4.8e-248 folC; tetrahydrofolate synthase K11754; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.795
KXA16424.1
HTH domain protein; KEGG: ova:OBV_10270 6.3e-56 pscK; pseudouridine kinase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.794
KXA16810.1
MaoC-like protein; KEGG: gvg:HMPREF0421_21228 0. fas; type I multifunctional fatty acid synthase; K11533 fatty acid synthase, bacteria type.
 
 
 
 0.791
KXA16986.1
TIM-barrel protein, nifR3 family; KEGG: bnm:BALAC2494_02053 2.1e-167 Oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.769
KXA17596.1
KEGG: apb:SAR116_0550 0.00029 ribosomal subunit interface protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.755
KXA16311.1
KEGG: gvg:HMPREF0421_20320 0. cafA; Rne/Rng family ribonuclease; K08300 ribonuclease E; Psort location: Cytoplasmic, score: 9.95.
 
  
 0.755
KXA17598.1
DNA repair protein RecN; KEGG: apb:SAR116_2325 1.2e-47 ATPase K03631; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.749
KXA15536.1
NAD+ synthase; KEGG: gvg:HMPREF0421_20632 3.3e-297 nadE; NH(3)-dependent NAD+ synthetase K01950; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.743
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.