STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA16298.1Homoserine kinase; KEGG: gvh:HMPREF9231_1240 1.7e-156 thrB; homoserine kinase K00872; Psort location: Cytoplasmic, score: 7.50. (350 aa)    
Predicted Functional Partners:
KXA15152.1
Threonine synthase; KEGG: gvh:HMPREF9231_0704 1.2e-251 thrC; threonine synthase K01733; Psort location: Cytoplasmic, score: 7.50.
 
 0.997
KXA16299.1
Homoserine dehydrogenase; KEGG: gvh:HMPREF9231_1241 1.8e-218 hom; homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 7.50.
 
 0.995
KXA15163.1
KEGG: gva:HMPREF0424_1033 4.2e-153 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933; Psort location: Cytoplasmic, score: 9.97.
    
 0.915
KXA16297.1
KEGG: bde:BDP_1927 1.7e-149 Maf-like protein K06287; Psort location: Cytoplasmic, score: 7.50.
     
 0.904
ArgS
arginine--tRNA ligase; KEGG: gvh:HMPREF9231_0203 0. argS; arginine--tRNA ligase K01887; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.719
KXA15973.1
ACT domain protein; KEGG: gvg:HMPREF0421_20041 7.5e-92 aspartate kinase K00928.
  
 
 0.709
KXA15974.1
Amino acid kinase family protein; KEGG: gvg:HMPREF0421_20042 2.7e-126 lysC; aspartate kinase 2 K00928; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.709
KXA15971.1
KEGG: gvg:HMPREF0421_20040 8.9e-176 asd; aspartate-semialdehyde dehydrogenase K00133; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.677
KXA16671.1
3-dehydroquinate synthase; KEGG: gvg:HMPREF0421_21086 6.5e-276 aroB; 3-dehydroquinate synthase K13829; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.653
PrfA
KEGG: rha:RHA1_ro01483 3.5e-94 prfA; peptide chain release factor 1 K02835; Psort location: Cytoplasmic, score: 9.97.
     
 0.652
Your Current Organism:
Gardnerella vaginalis
NCBI taxonomy Id: 2702
Other names: ATCC 14018, CCUG 3717, CIP 70.74, Corynebacterium vaginale, DSM 4944, G. vaginalis, Haemophilus hemolyticus vaginalis, Haemophilus vaginalis, JCM 11026, LMG 7832, LMG:7832, NCTC 10287, NCTC 10915, strain 594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.